Transcript: ENSDART00000187653.1 VAMP3-203

Description

vesicle-associated membrane protein 3 (cellubrevin) [Source:ZFIN;Acc:ZDB-GENE-040625-45]

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 845 variant alleles and maps to 178 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137516.4	VAMP3-201	1287	102aa	ENSDARP00000114025.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IQK3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187653.1	VAMP3-203	3633	102aa	ENSDARP00000145619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IQK3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134082.3	VAMP3-202	384	107aa	ENSDARP00000133743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,633 bps, Translation length: 102 residues

Version

ENSDART00000187653.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.