Transcript: ENSDART00000186310.1 TMEM132E-203

Description

transmembrane protein 132E [Source:ZFIN;Acc:ZDB-GENE-120926-3]

Location

Chromosome 5: 60,518,611-60,684,971 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 23 domains and features, is associated with 2564 variant alleles and maps to 211 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000090830.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130565.4	TMEM132E-202	3795	1073aa	ENSDARP00000107971.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L7VG99	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000159859.2	TMEM132E-201	4872	741aa	ENSDARP00000134693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000186310.1	TMEM132E-203	3657	1027aa	ENSDARP00000147632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,657 bps, Translation length: 1,027 residues

Version

ENSDART00000186310.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000186310.1 TMEM132E-203

Summary

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Transcript: ENSDART00000186310.1 TMEM132E-203

Summary

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