Transcript: ENSDART00000186174.1 TMX4-203

Description

thioredoxin-related transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050706-155]

Location

Chromosome 17: 3,993,772-4,017,948 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 22 domains and features, is associated with 670 variant alleles and maps to 97 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101512.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000186174.1	TMX4-203	1883	288aa	ENSDARP00000148577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000168613.2	TMX4-202	1883	275aa	ENSDARP00000137220.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000170822.2	TMX4-201	699	226aa	ENSDARP00000137207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,883 bps, Translation length: 288 residues

Version

ENSDART00000186174.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000186174.1 TMX4-203

Summary

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Transcript: ENSDART00000186174.1 TMX4-203

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