Transcript: ENSDART00000186047.1 trrap-204

Description

transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]

Gene Synonyms

fc54d09, im:7154030, wu:fc54d09

Location

Chromosome 12: 17,933,775-18,104,154 forward strand.

About this transcript

This transcript has 70 exons, is annotated with 42 domains and features, is associated with 3602 variant alleles and maps to 262 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100623.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160586.2	trrap-201	11526	3841aa	ENSDARP00000137625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITC5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000172062.2	trrap-203	12591	3834aa	ENSDARP00000137500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPE4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000186047.1	trrap-204	11505	3834aa	ENSDARP00000155347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPE4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000164740.2	trrap-202	972	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 70, Coding exons: 70, Transcript length: 11,505 bps, Translation length: 3,834 residues

Version

ENSDART00000186047.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000186047.1 trrap-204

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Transcript: ENSDART00000186047.1 trrap-204

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