Transcript: ENSDART00000185601.1 ino80db-203

Description

INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]

Location

Chromosome 6: 13,207,139-13,235,516 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 23 domains and features, is associated with 508 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000062226.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000089725.5	ino80db-201	4371	843aa	ENSDARP00000084158.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000182182.1	ino80db-202	6141	766aa	ENSDARP00000149517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000185601.1	ino80db-203	6036	731aa	ENSDARP00000153548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 6,036 bps, Translation length: 731 residues

Version

ENSDART00000185601.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000185601.1 ino80db-203

Summary

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Transcript: ENSDART00000185601.1 ino80db-203

Summary

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