Transcript: ENSDART00000183702.1 TNFAIP3-202

Description

TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]

Location

Chromosome 13: 1,182,257-1,208,930 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 26 domains and features, is associated with 552 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000027777.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000147959.2	TNFAIP3-201	2271	756aa	ENSDARP00000123481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000033528.8	TNFAIP3-203	2253	750aa	ENSDARP00000032728.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000183702.1	TNFAIP3-202	2193	730aa	ENSDARP00000154047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,193 bps, Translation length: 730 residues

Version

ENSDART00000183702.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000183702.1 TNFAIP3-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000183702.1 TNFAIP3-202

Summary

About Us

Get help

Our sister sites

Follow us