Transcript: ENSDART00000183342.1 nfat5b-203

Description

nuclear factor of activated T cells 5b [Source:ZFIN;Acc:ZDB-GENE-140106-7]

Location

Chromosome 7: 67,325,933-67,421,313 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 36 domains and features and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000102556.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170575.2	nfat5b-202	3774	1257aa	ENSDARP00000133380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIR4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000183342.1	nfat5b-203	3180	1059aa	ENSDARP00000154309.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000167564.2	nfat5b-201	1694	565aa	ENSDARP00000131570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,180 bps, Translation length: 1,059 residues

Version

ENSDART00000183342.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000183342.1 nfat5b-203

Summary

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Transcript: ENSDART00000183342.1 nfat5b-203

Summary

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