Transcript: ENSDART00000182741.1 trip11-205

Description

thyroid hormone receptor interactor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-9833]

Gene Synonyms

cb423, sb:cb423, sb:cb721, wu:fb71d07

Location

Chromosome 13: 33,175,260-33,207,424 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 54 domains and features, is associated with 669 variant alleles and maps to 355 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078381.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109667.5	trip11-201	10865	1984aa	ENSDARP00000100671.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1P007	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000182741.1	trip11-205	5856	1951aa	ENSDARP00000154937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000134383.3	trip11-202	3176	711aa	ENSDARP00000114650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000137576.2	trip11-203	733	245aa	ENSDARP00000121123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000146138.2	trip11-204	576	192aa	ENSDARP00000115531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 5,856 bps, Translation length: 1,951 residues

Version

ENSDART00000182741.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000182741.1 trip11-205

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