Transcript: ENSDART00000182666.1 utp25-202

Description

UTP25 small subunit processor component [Source:ZFIN;Acc:ZDB-GENE-021217-2]

Location

About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 302 variant alleles and maps to 179 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000026726.8	utp25-201	2720	753aa	ENSDARP00000011386.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PEH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000182666.1	utp25-202	2558	725aa	ENSDARP00000146837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,558 bps, Translation length: 725 residues

Version

ENSDART00000182666.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.