Transcript: ENSDART00000182579.1 lhfpl6-202

Description

LHFPL tetraspan subfamily member 6 [Source:ZFIN;Acc:ZDB-GENE-041212-82]

Gene Synonyms

lhfp, zgc:101683

Location

Chromosome 10: 31,938,796-32,041,846 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 22 domains and features, is associated with 2462 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000004363.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000019416.5	lhfpl6-201	2122	200aa	ENSDARP00000007599.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GTL3 Q5PRC1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182579.1	lhfpl6-202	5928	200aa	ENSDARP00000149721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GTL3 Q5PRC1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185634.1	lhfpl6-203	636	200aa	ENSDARP00000147943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GTL3 Q5PRC1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 5,928 bps, Translation length: 200 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5PRC1

Version

ENSDART00000182579.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000182579.1 lhfpl6-202

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Transcript: ENSDART00000182579.1 lhfpl6-202

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