Transcript: ENSDART00000182541.1 tmtc4-206

Description

transmembrane O-mannosyltransferase targeting cadherins 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]

Gene Synonyms

si:ch211-168k14.1, wu:fc58d04

Location

Chromosome 9: 31,494,941-31,525,126 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 57 domains and features, is associated with 538 variant alleles and maps to 278 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020447.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127214.4	tmtc4-201	2748	739aa	ENSDARP00000109667.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6W0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182541.1	tmtc4-206	5905	739aa	ENSDARP00000148495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6W0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184736.1	tmtc4-207	5705	739aa	ENSDARP00000156827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6W0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142904.2	tmtc4-204	955	299aa	ENSDARP00000113305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146268.2	tmtc4-205	579	32aa	ENSDARP00000118642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133427.2	tmtc4-202	565	62aa	ENSDARP00000117559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136838.2	tmtc4-203	723	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 5,905 bps, Translation length: 739 residues

Version

ENSDART00000182541.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000182541.1 tmtc4-206

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Transcript: ENSDART00000182541.1 tmtc4-206

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