Transcript: ENSDART00000180348.1 pitx3-203

Description

paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]

Location

Chromosome 13: 7,555,720-7,567,728 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 16 domains and features, is associated with 324 variant alleles and maps to 133 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000070069.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102538.6	pitx3-201	1865	293aa	ENSDARP00000093314.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GRZ8 Q6QU75	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180348.1	pitx3-203	2269	306aa	ENSDARP00000144770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190296.1	pitx3-204	921	293aa	ENSDARP00000146864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GRZ8 Q6QU75	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159443.2	pitx3-202	884	280aa	ENSDARP00000139963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,269 bps, Translation length: 306 residues

Version

ENSDART00000180348.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000180348.1 pitx3-203

Summary

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Transcript: ENSDART00000180348.1 pitx3-203

Summary

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