Transcript: ENSDART00000180240.1 clcc1-202

Description

chloride channel CLIC-like 1 [Source:ZFIN;Acc:ZDB-GENE-121114-9]

Location

About this transcript

This transcript has 11 exons, is annotated with 29 domains and features, is associated with 1 variant allele and maps to 63 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000180240.1	clcc1-202	3716	609aa	ENSDARP00000147377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q3S9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000164256.2	clcc1-201	3638	583aa	ENSDARP00000141396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9GYN2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,716 bps, Translation length: 609 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0A2R8Q3S9

Version

ENSDART00000180240.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.