Transcript: ENSDART00000179986.1 rpusd4-203

Description

RNA pseudouridine synthase D4 [Source:ZFIN;Acc:ZDB-GENE-040801-238]

Gene Synonyms

si:ch211-14i3.3, zgc:92006

Location

Chromosome 11: 17,984,354-18,081,744 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 1370 variant alleles and maps to 153 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000012674.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020283.8	rpusd4-201	1748	358aa	ENSDARP00000011603.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBR0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188329.1	rpusd4-204	1383	358aa	ENSDARP00000144970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBR0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179986.1	rpusd4-203	1077	358aa	ENSDARP00000152597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBR0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168082.2	rpusd4-202	706	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,077 bps, Translation length: 358 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6DBR0

Version

ENSDART00000179986.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000179986.1 rpusd4-203

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Transcript: ENSDART00000179986.1 rpusd4-203

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