Transcript: ENSDART00000179953.1 tdrd5-202

Description

tudor domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-502]

Gene Synonyms

si:dkey-171o17.7

Location

Chromosome 22: 17,261,801-17,280,853 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 25 domains and features, is associated with 679 variant alleles and maps to 180 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000071450.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134798.2	tdrd5-201	3268	905aa	ENSDARP00000122775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L981-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000193187.1	tdrd5-204	4083	947aa	ENSDARP00000151602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000179953.1	tdrd5-202	3999	919aa	ENSDARP00000156596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000192978.1	tdrd5-203	3568	936aa	ENSDARP00000151301.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,999 bps, Translation length: 919 residues

Version

ENSDART00000179953.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000179953.1 tdrd5-202

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000179953.1 tdrd5-202

Summary

About Us

Get help

Our sister sites

Follow us