Transcript: ENSDART00000179314.2 grhl1-207

Description

grainyhead-like transcription factor 1 [Source:NCBI gene (formerly Entrezgene);Acc:324942]

Location

Chromosome 17: 32,391,095-32,426,413 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 6 domains and features, is associated with 918 variant alleles and maps to 106 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061391.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148455.3	grhl1-202	2069	613aa	ENSDARP00000124180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000149885.2	grhl1-206	2171	447aa	ENSDARP00000124914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000179314.2	grhl1-207	2054	601aa	ENSDARP00000144151.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YAF2	-
ENSDART00000149102.2	grhl1-204	586	195aa	ENSDARP00000123737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000149715.3	grhl1-205	611	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148378.2	grhl1-201	302	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148796.2	grhl1-203	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,054 bps, Translation length: 601 residues

Version

ENSDART00000179314.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000179314.2 grhl1-207

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Transcript: ENSDART00000179314.2 grhl1-207

Summary

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