Transcript: ENSDART00000178840.2 hdlbpb-204

Description

high density lipoprotein binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6822]

Gene Synonyms

fa07b03, sb:eu532, si:dkey-38p12.2, wu:fa07b03

Location

Chromosome 12: 22,407,852-22,444,387 forward strand.

About this transcript

This transcript has 26 exons, is annotated with 98 domains and features, is associated with 888 variant alleles and maps to 359 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061864.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153055.2	hdlbpb-202	4622	1259aa	ENSDARP00000127252.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCA5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000178840.2	hdlbpb-204	3780	1259aa	ENSDARP00000144455.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCA5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153050.2	hdlbpb-201	836	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000153238.2	hdlbpb-203	503	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 3,780 bps, Translation length: 1,259 residues

Version

ENSDART00000178840.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000178840.2 hdlbpb-204

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Transcript: ENSDART00000178840.2 hdlbpb-204

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