Transcript: ENSDART00000177589.2 hnrnpk-210

Description

heteroous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]

Gene Synonyms

hnrpk, wu:fb37h02, wu:fi34c04, zgc:66162

Location

Chromosome 8: 49,744,801-49,764,156 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 35 domains and features, is associated with 413 variant alleles and maps to 335 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000018914.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000177589.2	hnrnpk-210	3023	429aa	ENSDARP00000144257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWB4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189142.1	hnrnpk-211	2987	417aa	ENSDARP00000146195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q139	-
ENSDART00000097919.5	hnrnpk-201	2227	429aa	ENSDARP00000088691.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWB4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147309.3	hnrnpk-209	2195	420aa	ENSDARP00000120947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000140609.2	hnrnpk-206	1186	281aa	ENSDARP00000117204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000137941.2	hnrnpk-205	551	148aa	ENSDARP00000122449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131928.3	hnrnpk-202	849	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000135841.2	hnrnpk-204	891	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000143950.2	hnrnpk-207	775	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000132395.2	hnrnpk-203	719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000147151.2	hnrnpk-208	423	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,023 bps, Translation length: 429 residues

Version

ENSDART00000177589.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000177589.2 hnrnpk-210

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000177589.2 hnrnpk-210

Summary

About Us

Get help

Our sister sites

Follow us