Transcript: ENSDART00000176858.2 CENPF-203

Description

centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]

Location

Chromosome 17: 32,720,413-32,743,249 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 62 domains and features, is associated with 426 variant alleles and maps to 104 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055133.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135517.3	CENPF-201	9162	2708aa	ENSDARP00000115642.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7X5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000189622.1	CENPF-202	11212	2654aa	ENSDARP00000152810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000176858.2	CENPF-203	11020	2675aa	ENSDARP00000143468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y8J7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 11,020 bps, Translation length: 2,675 residues

Version

ENSDART00000176858.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000176858.2 CENPF-203

Summary

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Transcript: ENSDART00000176858.2 CENPF-203

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