Transcript: ENSDART00000176451.2 si:dkey-27h10.2-204

Description

si:dkey-27h10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-296]

Location

Chromosome 1: 35,662,474-35,695,724 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 21 domains and features, is associated with 1008 variant alleles and maps to 57 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094485.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000176451.2	si:dkey-27h10.2-204	2411	307aa	ENSDARP00000143819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P6I6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133813.4	si:dkey-27h10.2-201	1008	307aa	ENSDARP00000116761.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P6I6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136157.3	si:dkey-27h10.2-202	742	223aa	ENSDARP00000115861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000145291.2	si:dkey-27h10.2-203	578	188aa	ENSDARP00000118973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,411 bps, Translation length: 307 residues

Version

ENSDART00000176451.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000176451.2 si:dkey-27h10.2-204

Summary

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Transcript: ENSDART00000176451.2 si:dkey-27h10.2-204

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