Transcript: ENSDART00000175525.2 LRRCC1-204

Description

leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]

Location

Chromosome 2: 31,686,365-31,711,547 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 30 domains and features, is associated with 365 variant alleles and maps to 134 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078535.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189763.1	LRRCC1-202	4664	997aa	ENSDARP00000149331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R597	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000113498.4	LRRCC1-203	4060	997aa	ENSDARP00000099746.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R597	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000175525.2	LRRCC1-204	3872	991aa	ENSDARP00000144330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142366.3	LRRCC1-201	1984	555aa	ENSDARP00000115885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 3,872 bps, Translation length: 991 residues

Version

ENSDART00000175525.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000175525.2 LRRCC1-204

Summary

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Transcript: ENSDART00000175525.2 LRRCC1-204

Summary

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