Transcript: ENSDART00000174394.2 si:cabz01070274.1-204

Description

si:cabz01070274.1 [Source:ZFIN;Acc:ZDB-GENE-161017-113]

Location

Chromosome 18: 49,001,425-49,020,066 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 62 domains and features, is associated with 277 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099137.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000160702.2	si:cabz01070274.1-201	5037	1678aa	ENSDARP00000134892.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174157.2	si:cabz01070274.1-203	4263	1383aa	ENSDARP00000143091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000174394.2	si:cabz01070274.1-204	3309	652aa	ENSDARP00000143223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000174103.2	si:cabz01070274.1-202	1035	301aa	ENSDARP00000143190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,309 bps, Translation length: 652 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000174394.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000174394.2 si:cabz01070274.1-204

Summary

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Transcript: ENSDART00000174394.2 si:cabz01070274.1-204

Summary

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