Transcript: ENSDART00000174308.2 LRRC4C-201

Description

leucine rich repeat containing 4C, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-080327-5]

Location

About this transcript

This transcript has 2 exons, is annotated with 47 domains and features, is associated with 968 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000174308.2	LRRC4C-201	4447	631aa	ENSDARP00000143193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCU7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000021605.7	LRRC4C-202	1896	631aa	ENSDARP00000012462.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCU7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 4,447 bps, Translation length: 631 residues

Version

ENSDART00000174308.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.