Transcript: ENSDART00000174255.2 katnb1-205

Description

katanin p80 (WD repeat containing) subunit B 1 [Source:NCBI gene;Acc:406291]

Gene Synonyms

wu:fj32f02, wu:fj65h01, zgc:56071

Location

Chromosome 7: 52,175,440-52,178,708 forward strand.

About this transcript

This transcript has 3 exons, is associated with 125 variant alleles and maps to 35 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000005456.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014632.10	katnb1-201	2572	694aa	ENSDARP00000024623.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUV2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174389.2	katnb1-206	1050	247aa	ENSDARP00000143077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1L1QZF5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000174042.2	katnb1-202	769	163aa	ENSDARP00000143025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1L1QZA4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000174099.2	katnb1-203	741	145aa	ENSDARP00000143087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1L1QZG7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000174228.2	katnb1-204	701	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000174255.2	katnb1-205	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 542 bps,

Version

ENSDART00000174255.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000174255.2 katnb1-205

Summary

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Transcript: ENSDART00000174255.2 katnb1-205

Summary

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