Transcript: ENSDART00000174223.2 ADGRL3-202

Description

adhesion G protein-coupled receptor L3.2 [Source:ZFIN;Acc:ZDB-GENE-130116-6]

Location

Chromosome 7: 72,882,494-73,013,801 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 19 domains and features, is associated with 1361 variant alleles and maps to 57 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000090624.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000131113.3	ADGRL3-203	4206	1401aa	ENSDARP00000109937.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000174223.2	ADGRL3-202	1766	589aa	ENSDARP00000143079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000174340.2	ADGRL3-201	6291	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,766 bps, Translation length: 589 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000174223.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000174223.2 ADGRL3-202

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Transcript: ENSDART00000174223.2 ADGRL3-202

Summary

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