Transcript: ENSDART00000174038.2 si:zfos-464b6.2-202

Description

si:zfos-464b6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5337]

Location

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 564 variant alleles and maps to 115 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000076554.6	si:zfos-464b6.2-201	1875	468aa	ENSDARP00000071026.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FE65	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174038.2	si:zfos-464b6.2-202	928	282aa	ENSDARP00000143219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000174248.2	si:zfos-464b6.2-203	518	106aa	ENSDARP00000143134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 928 bps, Translation length: 282 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000174038.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.