Transcript: ENSDART00000174035.2 si:cabz01054394.5-202

Description

si:cabz01054394.5 [Source:ZFIN;Acc:ZDB-GENE-161017-87]

Location

Chromosome 4: 72,578,548-72,592,438 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 60 domains and features, is associated with 335 variant alleles and maps to 54 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000089092.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000174035.2	si:cabz01054394.5-202	4520	441aa	ENSDARP00000143132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7L9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182434.1	si:cabz01054394.5-203	1740	441aa	ENSDARP00000148854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7L9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124528.3	si:cabz01054394.5-201	1326	441aa	ENSDARP00000110779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7L9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 4,520 bps, Translation length: 441 residues

Version

ENSDART00000174035.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

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Transcript: ENSDART00000174035.2 si:cabz01054394.5-202

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Transcript: ENSDART00000174035.2 si:cabz01054394.5-202

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