Transcript: ENSDART00000173967.2 zgc:153219-203

Description

zgc:153219 [Source:ZFIN;Acc:ZDB-GENE-060929-144]

Location

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 209 variant alleles and maps to 64 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142450.2	zgc:153219-202	2165	325aa	ENSDARP00000119142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000073554.7	zgc:153219-201	1002	325aa	ENSDARP00000068044.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYP1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173967.2	zgc:153219-203	847	234aa	ENSDARP00000142909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 847 bps, Translation length: 234 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000173967.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.