Transcript: ENSDART00000173918.2 dennd2b-205

Description

DENN domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-030131-2547]

Gene Synonyms

si:ch211-208c6.1, st5, wu:fc11b09, zgc:91902

Location

Chromosome 7: 28,500,071-28,549,361 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 849 variant alleles and maps to 40 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037363.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054368.5	dennd2b-201	3456	1132aa	ENSDARP00000054367.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6K3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000113313.3	dennd2b-202	4225	1125aa	ENSDARP00000100317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RHZ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000173918.2	dennd2b-205	641	205aa	ENSDARP00000142811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSJ5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173592.2	dennd2b-204	757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000143543.2	dennd2b-203	495	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 641 bps, Translation length: 205 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000173918.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

Transcript: ENSDART00000173918.2 dennd2b-205

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Transcript: ENSDART00000173918.2 dennd2b-205

Summary

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