Transcript: ENSDART00000173853.2 dnaaf1-202

Description

dynein axonemal assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]

Gene Synonyms

loc123872, lrrc50, switch hitter, swt, unm tm317b, zgc:56169

Location

About this transcript

This transcript has 5 exons, is associated with 176 variant alleles and maps to 62 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145762.4	dnaaf1-201	2594	562aa	ENSDARP00000115728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q654	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173909.2	dnaaf1-203	550	147aa	ENSDARP00000142875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173853.2	dnaaf1-202	604	66aa	ENSDARP00000142666.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 604 bps, Translation length: 66 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000173853.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.