Transcript: ENSDART00000173830.2 slc7a9-205

Description

solute carrier family 7 member 9 [Source:HGNC Symbol;Acc:HGNC:11067]

Location

Chromosome 7: 38,507,006-38,527,833 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 45 domains and features, is associated with 6 variant alleles and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000005894.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173830.2	slc7a9-205	2179	492aa	ENSDARP00000142939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGJ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173468.2	slc7a9-203	2150	492aa	ENSDARP00000142663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGJ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000100479.7	slc7a9-201	2087	492aa	ENSDARP00000091252.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGJ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153482.3	slc7a9-202	1437	478aa	ENSDARP00000128688.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173635.2	slc7a9-204	705	50aa	ENSDARP00000142814.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,179 bps, Translation length: 492 residues

Version

ENSDART00000173830.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENSDART00000173830.2 slc7a9-205

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Transcript: ENSDART00000173830.2 slc7a9-205

Summary

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