Transcript: ENSDART00000173816.2 MADD-206

Description

MAP-kinase activating death domain [Source:ZFIN;Acc:ZDB-GENE-030131-8076]

Location

Chromosome 7: 34,336,908-34,339,845 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 144 variant alleles and maps to 2 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003495.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000173673.2	MADD-201	6979	1680aa	ENSDARP00000142843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000047208.8	MADD-208	5205	1449aa	ENSDARP00000047207.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000174546.2	MADD-207	4981	1508aa	ENSDARP00000143875.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000173454.2	MADD-202	450	80aa	ENSDARP00000142707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173816.2	MADD-206	182	61aa	ENSDARP00000142765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000173526.2	MADD-204	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000173988.2	MADD-205	538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000173605.2	MADD-203	480	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 182 bps, Translation length: 61 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000173816.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENSDART00000173816.2 MADD-206

Summary

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Transcript: ENSDART00000173816.2 MADD-206

Summary

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