Transcript: ENSDART00000173793.2 si:dkey-28a3.2-202

Description

si:dkey-28a3.2 [Source:ZFIN;Acc:ZDB-GENE-141216-60]

Location

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features and is associated with 109 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165110.3	si:dkey-28a3.2-201	6493	1072aa	ENSDARP00000133793.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3AU01	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173793.2	si:dkey-28a3.2-202	3253	835aa	ENSDARP00000142951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 3,253 bps, Translation length: 835 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000173793.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]