Transcript: ENSDART00000173789.2 rnf111-204

Description

ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]

Gene Synonyms

zmp:0000001195

Location

Chromosome 7: 30,563,098-30,605,090 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 47 domains and features, is associated with 1061 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078802.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173789.2	rnf111-204	3231	1032aa	ENSDARP00000142775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4KWC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000173828.2	rnf111-205	5054	1003aa	ENSDARP00000142644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	N0A274	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000111626.4	rnf111-201	3147	1004aa	ENSDARP00000101817.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWE1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000166046.2	rnf111-202	3144	1003aa	ENSDARP00000137956.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	N0A274	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000173775.2	rnf111-203	3119	995aa	ENSDARP00000142752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,231 bps, Translation length: 1,032 residues

Version

ENSDART00000173789.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000173789.2 rnf111-204

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Transcript: ENSDART00000173789.2 rnf111-204

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