Transcript: ENSDART00000173714.2 si:dkey-19b23.13-203

Description

si:dkey-19b23.13 [Source:ZFIN;Acc:ZDB-GENE-140106-78]

Gene Synonyms

zmp:0000001118

Location

About this transcript

This transcript has 13 exons, is annotated with 29 domains and features, is associated with 1562 variant alleles and maps to 127 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173714.2	si:dkey-19b23.13-203	2854	725aa	ENSDARP00000142852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KGQ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171155.2	si:dkey-19b23.13-201	2178	725aa	ENSDARP00000131488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KGQ3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173488.2	si:dkey-19b23.13-202	551	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,854 bps, Translation length: 725 residues

Version

ENSDART00000173714.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.