Transcript: ENSDART00000173694.2 si:cabz01076231.1-201

Description

si:cabz01076231.1 [Source:ZFIN;Acc:ZDB-GENE-160728-151]

Location

Chromosome 7: 813,055-823,304 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 47 variant alleles and maps to 5 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000105631.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189926.1	si:cabz01076231.1-202	1943	218aa	ENSDARP00000153478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QKE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192318.1	si:cabz01076231.1-203	1943	218aa	ENSDARP00000149894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QKE6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173694.2	si:cabz01076231.1-201	322	107aa	ENSDARP00000142720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 322 bps, Translation length: 107 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000173694.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000173694.2 si:cabz01076231.1-201

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Transcript: ENSDART00000173694.2 si:cabz01076231.1-201

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