Transcript: ENSDART00000173693.2 APBA2-201

Description

amyloid beta (A4) precursor protein-binding, family A, member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5371]

Location

Chromosome 7: 30,875,273-30,906,493 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 967 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000060639.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000174000.2	APBA2-204	4027	833aa	ENSDARP00000142680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NS70	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000085661.6	APBA2-205	2637	821aa	ENSDARP00000080096.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9E4	-
ENSDART00000193106.1	APBA2-206	2376	791aa	ENSDARP00000148950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173990.2	APBA2-202	755	150aa	ENSDARP00000142815.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173693.2	APBA2-201	644	215aa	ENSDARP00000142867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000173834.2	APBA2-203	513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 644 bps, Translation length: 215 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000173693.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000173693.2 APBA2-201

Summary

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Transcript: ENSDART00000173693.2 APBA2-201

Summary

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