Transcript: ENSDART00000173621.2 sat2a-203

Description

spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]

Gene Synonyms

sat2, zgc:103590

Location

About this transcript

This transcript has 5 exons, is associated with 61 variant alleles and maps to 162 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052922.5	sat2a-201	996	171aa	ENSDARP00000052921.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PR44	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173621.2	sat2a-203	1028	119aa	ENSDARP00000142809.1	Nonsense mediated decay	A0A1D5NSJ3	-
ENSDART00000133692.2	sat2a-202	757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,028 bps, Translation length: 119 residues

Version

ENSDART00000173621.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.