Transcript: ENSDART00000173618.2 MYO1E-202

Description

myosin IEa [Source:ZFIN;Acc:ZDB-GENE-030131-5127]

Location

About this transcript

This transcript has 5 exons, is annotated with 17 domains and features, is associated with 326 variant alleles and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052539.7	MYO1E-201	4565	1117aa	ENSDARP00000052538.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FDV0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188360.1	MYO1E-204	2946	981aa	ENSDARP00000157042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173618.2	MYO1E-202	817	193aa	ENSDARP00000142675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000191633.1	MYO1E-205	623	88aa	ENSDARP00000156481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173626.2	MYO1E-203	612	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 817 bps, Translation length: 193 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000173618.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.