Transcript: ENSDART00000173609.2 fxr2-203

Description

fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]

Gene Synonyms

id:ibd5046, zgc:56215, zgc:77472

Location

Chromosome 7: 22,747,915-22,759,713 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 137 variant alleles and maps to 126 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000016260.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000027718.9	fxr2-201	4106	676aa	ENSDARP00000004667.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RC77	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000143341.3	fxr2-202	2521	583aa	ENSDARP00000113332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QG02	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000173609.2	fxr2-203	729	160aa	ENSDARP00000142685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NS75	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 729 bps, Translation length: 160 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000173609.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000173609.2 fxr2-203

Summary

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Transcript: ENSDART00000173609.2 fxr2-203

Summary

About Us

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