Transcript: ENSDART00000173565.2 dgkza-202

Description

diacylglycerol kinase, zeta a [Source:ZFIN;Acc:ZDB-GENE-111104-3]

Location

Chromosome 7: 38,962,207-39,089,487 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 17 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014439.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173825.2	dgkza-204	3839	1222aa	ENSDARP00000142754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSE1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000173855.2	dgkza-206	7270	1027aa	ENSDARP00000142665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000173851.2	dgkza-205	6806	1038aa	ENSDARP00000142887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000181845.1	dgkza-207	3669	1222aa	ENSDARP00000152273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSE1	-
ENSDART00000093009.6	dgkza-201	3156	1051aa	ENSDARP00000087441.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000173565.2	dgkza-202	1061	302aa	ENSDARP00000142859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173735.2	dgkza-203	753	224aa	ENSDARP00000142734.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,061 bps, Translation length: 302 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000173565.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000173565.2 dgkza-202

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000173565.2 dgkza-202

Summary

About Us

Get help

Our sister sites

Follow us