Transcript: ENSDART00000173523.2 NKD1-201

Description

NKD inhibitor of WNT signaling pathway 1 [Source:ZFIN;Acc:ZDB-GENE-061108-3]

Location

About this transcript

This transcript has 10 exons, is annotated with 20 domains and features, is associated with 604 variant alleles and maps to 204 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173523.2	NKD1-201	5120	440aa	ENSDARP00000142757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S7E2 Q2TJA6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000052379.7	NKD1-202	1320	439aa	ENSDARP00000052378.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I7Q3W8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 5,120 bps, Translation length: 440 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2TJA6

Version

ENSDART00000173523.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.