Transcript: ENSDART00000173495.2 gigyf1a-202

Description

GRB10 interacting GYF protein 1a [Source:ZFIN;Acc:ZDB-GENE-050809-79]

Gene Synonyms

im:7159406

Location

About this transcript

This transcript has 23 exons, is annotated with 37 domains and features, is associated with 581 variant alleles and maps to 107 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173495.2	gigyf1a-202	3723	1048aa	ENSDARP00000142938.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSW7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000164172.2	gigyf1a-201	3615	1012aa	ENSDARP00000141115.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2L8K5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 3,723 bps, Translation length: 1,048 residues

Version

ENSDART00000173495.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.