Transcript: ENSDART00000173483.2 PYGM-201

Description

phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]

Location

Chromosome 7: 22,849,657-22,852,189 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 184 variant alleles and maps to 196 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000013317.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148576.4	PYGM-202	5047	842aa	ENSDARP00000124162.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EXT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127467.4	PYGM-204	3293	842aa	ENSDARP00000111947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EXT3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149993.2	PYGM-203	871	195aa	ENSDARP00000124042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173483.2	PYGM-201	770	49aa	ENSDARP00000142892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 770 bps, Translation length: 49 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000173483.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENSDART00000173483.2 PYGM-201

Summary

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Transcript: ENSDART00000173483.2 PYGM-201

Summary

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