Transcript: ENSDART00000173478.2 PSMC3-202

Description

proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]

Location

About this transcript

This transcript has 6 exons, is associated with 9 variant alleles and maps to 66 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000007913.12	PSMC3-203	1811	404aa	ENSDARP00000026554.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000171691.2	PSMC3-201	1554	427aa	ENSDARP00000136258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILA8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173478.2	PSMC3-202	508	41aa	ENSDARP00000142660.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 508 bps, Translation length: 41 residues

Version

ENSDART00000173478.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.