Transcript: ENSDART00000173471.2 si:dkey-33c9.6-202

Description

si:dkey-33c9.6 [Source:ZFIN;Acc:ZDB-GENE-130530-592]

Location

Chromosome 7: 20,393,386-20,403,044 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 623 variant alleles and maps to 30 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000036420.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052906.6	si:dkey-33c9.6-201	6837	828aa	ENSDARP00000052905.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F9C1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173809.2	si:dkey-33c9.6-203	2802	828aa	ENSDARP00000142678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F9C1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173471.2	si:dkey-33c9.6-202	785	247aa	ENSDARP00000142661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 785 bps, Translation length: 247 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000173471.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000173471.2 si:dkey-33c9.6-202

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Transcript: ENSDART00000173471.2 si:dkey-33c9.6-202

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