Transcript: ENSDART00000173439.2 zgc:112265-204

Description

zgc:112265 [Source:ZFIN;Acc:ZDB-GENE-050626-133]

Gene Synonyms

si:ch211-210k13.1, wu:fj67a04

Location

About this transcript

This transcript has 24 exons, is annotated with 14 domains and features, is associated with 102 variant alleles and maps to 287 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173439.2	zgc:112265-204	3195	919aa	ENSDARP00000142629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LH97	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000171273.2	zgc:112265-202	2748	915aa	ENSDARP00000139541.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IT72	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173076.2	zgc:112265-203	866	258aa	ENSDARP00000142315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGD6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000160930.2	zgc:112265-201	857	211aa	ENSDARP00000131465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IEF2	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,195 bps, Translation length: 919 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000173439.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.