Transcript: ENSDART00000173418.2 MIB1-201

Description

MIB E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]

Location

Chromosome 2: 4,146,299-4,159,744 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 18 domains and features, is associated with 5 variant alleles and maps to 112 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000102184.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000163507.3	MIB1-205	3227	1041aa	ENSDARP00000132570.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9GYU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000158602.3	MIB1-204	4673	1038aa	ENSDARP00000135215.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000165634.3	MIB1-206	3293	1030aa	ENSDARP00000139883.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q804S5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173418.2	MIB1-201	712	237aa	ENSDARP00000142055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000171170.2	MIB1-202	698	233aa	ENSDARP00000141673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000163737.2	MIB1-203	1647	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 712 bps, Translation length: 237 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000173418.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000173418.2 MIB1-201

Summary

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Transcript: ENSDART00000173418.2 MIB1-201

Summary

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