Transcript: ENSDART00000173393.2 arhgef6-203

Description

Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-101013-2]

Location

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 101 variant alleles and maps to 27 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000003345.9	arhgef6-201	3333	766aa	ENSDARP00000007758.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F836	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148550.3	arhgef6-202	5872	759aa	ENSDARP00000123688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173393.2	arhgef6-203	295	98aa	ENSDARP00000142213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 295 bps, Translation length: 98 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000173393.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]