Transcript: ENSDART00000173376.2 INTU-202

Description

inturned planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-110914-91]

Location

Chromosome 7: 7,708,296-7,766,920 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 17 domains and features, is associated with 891 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077639.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113131.4	INTU-203	3682	926aa	ENSDARP00000101586.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UJB2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000173376.2	INTU-202	6550	915aa	ENSDARP00000142182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCN8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000173021.2	INTU-201	782	229aa	ENSDARP00000142459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 6,550 bps, Translation length: 915 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: E7FCN8

Version

ENSDART00000173376.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000173376.2 INTU-202

Summary

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Transcript: ENSDART00000173376.2 INTU-202

Summary

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